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Table 1 ZFN targeting and cleaving within the hemoglobin, beta ( β A )-gene

From: Zinc finger nucleases for targeted mutagenesis and repair of the sickle-cell disease mutation: An in-silico study

Zinc Finger Nuclease (ZFN)

Left Fn; triplet- α-Helix

Right Fn; triplet- α-Helix

-targeting HBB ( β A)-DNA at 5′ Sites

ZFN-unknown-SP-5-1

  

5′_82 cCGTTACTGCCCTGT GGGGCAAGGt 106_′3

F1; RNITLVR; (ACG)

F1; RNEHLKV; (AGG)

5′_82 gGCAATGACGGGACACCCCGTTCCa 106_′3

F2; QRSSLVR; (GTA)

F2; QSTTLKR; (GCA)

 

F3; QDNTLRR; (GCA)

F3; RTEHLAR; (GGG)

-targeting HBB ( β A )-DNA at 3′ Sites

ZFN-unknown-SP-7-1

  

5′_1333 cTTCCTCCCACAGCTCCTGGGCAACGt 1359_′3

F1; QASNLLR; (GAA)

F1; RSQTLAQ; (ACG)

5′_1333 gAAGGAGGGTGTCGAGGACCCGTTGCa 1359_′3

F2; RQDNLGR; (GAG)

F2; QSTTLKR; (GCA)

 

F3; RMDHLAG; (TGG)

F3; RSDHLSL; (TGG)

ZFN-unknown-SP-6-1

  

5′_1334 tTCCTCCCACAGCTCCTGGGCAACGt 1359_′3

F1; RTDRLIR; (GGA)

F1; RSQTLAQ; (ACG)

5′_1334 aAGGAGGGTGTCGAGGACCCGTTGCa 1359_′3

F2; QSAHLKR; (GGA)

F2; QSTTLKR; (GCA)

 

F3; RNTALQH; (GTG)

F3; RSDHLSL; (TGG)